GBM_Pattern_Segments hg38-hg19_Chromosome hg38-hg19_Agilent_Probe_ID_Start hg38-hg19_Agilent_Probe_ID_End hg38-hg19_211653_Agilent_Probe_Start hg38-hg19_211653_Agilent_Probe_End hg38-hg19_30358_Agilent_Probe_Start hg38-hg19_30358_Agilent_Probe_End hg38-hg19_Agilent_Probe_Length hg38_Chromosome hg38_Bin_Start=Agilent_Probe_Genomic_Start-500 hg38_Bin_End=Agilent_Probe_Genomic_End+500 hg38_Agilent_Probe_ID_Start hg38_Agilent_Probe_ID_End hg38_Agilent_Probe_Start hg38_Agilent_Probe_End hg38_Agilent_Probe_Length hg19_Chromosome hg19_Bin_Start=Agilent_Probe_Genomic_Start-500 hg19_Bin_End=Agilent_Probe_Genomic_End+500 hg19_Agilent_Probe_ID_Start hg19_Agilent_Probe_ID_End hg19_Agilent_Probe_Start hg19_Agilent_Probe_End hg19_Agilent_Probe_Length hg18_Chromosome hg18_Genomic_Start hg18_Genomic_End hg18_Agilent_Probe_ID_Start hg18_Agilent_Probe_ID_End Segment_Mean Segment_Deviation_from_Genomic_Mean Segment_Deviation_from_Chromosomal_Mean Segment_CNA Segment_1 1 A_14_P112718 A_14_P106949 1 300 1 300 300 1 628524 3859635 A_14_P112718 A_14_P106949 1 300 300 1 563904 3776199 A_14_P112718 A_14_P106949 1 301 301 1 554268 3765559 A_14_P112718 A_14_P106949 -0.000222746 -0.181932653 -0.679370982 No_CNA Segment_2 1 A_16_P00003969 A_16_P15025872 301 840 301 840 540 1 3870714 10589665 A_16_P00003969 A_16_P15025872 301 840 540 1 3787278 10649722 A_16_P00003969 A_16_P15025872 302 841 540 1 3777639 10571809 A_16_P00003969 A_16_P15025872 -0.001647216 -1.684479916 -3.09862207 Loss Segment_3 1 A_14_P135931 A_16_P15032580 841 1057 841 1057 217 1 10601691 13449138 A_14_P135931 A_16_P15032580 841 1057 217 1 10661748 13775605 A_14_P135931 A_16_P15032580 842 1059 218 1 10584836 13647692 A_14_P135931 A_16_P15032580 -7.60E-05 -0.027111841 -0.430094019 No_CNA Segment_4 1 A_16_P15032593 A_16_P00017529 1058 1106 1058 1106 49 1 13455199 14228589 A_16_P15032593 A_16_P00017529 1058 1106 49 1 13781666 14555084 A_16_P15032593 A_16_P00017529 1060 1108 49 1 13654754 14427171 A_16_P15032593 A_16_P00017529 0.001228657 1.349022649 1.785619885 Gain Segment_5 1 A_16_P00017590 A_16_P15060939 1107 2096 1107 2096 990 1 14261821 25259384 A_16_P00017590 A_16_P15060939 1107 2096 990 1 14588316 25585875 A_16_P00017590 A_16_P15060939 1109 2102 994 1 14461404 25457962 A_16_P00017590 A_16_P15060939 8.28E-05 0.14040044 -0.160382525 No_CNA Segment_6 1 A_16_P15061000 A_16_P00032101 2097 2100 2097 2100 4 1 25289344 25331030 A_16_P15061000 A_16_P00032101 2097 2100 4 1 25615835 25657521 A_16_P15061000 A_16_P00032101 2103 2106 4 1 25488923 25529608 A_16_P15061000 A_16_P00032101 -0.001847056 -1.895273881 -3.438021396 Loss Segment_7 1 A_16_P00032102 A_16_P15076201 2101 2740 2101 2740 640 1 25336507 32431900 A_16_P00032102 A_16_P15076201 2101 2740 640 1 25662998 32897501 A_16_P00032102 A_16_P15076201 2107 2746 640 1 25536086 32669588 A_16_P00032102 A_16_P15076201 0.000124279 0.184113186 -0.090000641 No_CNA Segment_8 1 A_16_P35080968 A_16_P00041158 2741 2805 2741 2805 65 1 32456556 33055733 A_16_P35080968 A_16_P00041158 2741 2805 65 1 32922157 33521334 A_16_P35080968 A_16_P00041158 2747 2811 65 1 32695245 33293421 A_16_P35080968 A_16_P00041158 0.001797549 1.949096783 2.751799143 Gain Segment_9 1 A_16_P15077447 A_16_P15193656 2806 6841 2806 6841 4036 1 33061438 83132005 A_16_P15077447 A_16_P15193656 2806 6841 4036 1 33527039 83597688 A_16_P15077447 A_16_P15193656 2812 6847 4036 1 33300127 83369776 A_16_P15077447 A_16_P15193656 0.000455622 0.533617079 0.472735518 No_CNA Segment_10 1 A_16_P00109668 A_16_P00109785 6842 6850 6842 6850 9 1 83150054 83457884 A_16_P00109668 A_16_P00109785 6842 6850 9 1 83615737 83923567 A_16_P00109668 A_16_P00109785 6848 6856 9 1 83388826 83695655 A_16_P00109668 A_16_P00109785 0.001607941 1.749095925 2.429777797 Gain Segment_11_NOTCH2/NBPF14/NOTCH2NL 1 A_14_P139024 A_14_P119649 6851 11083 6851 11083 4233 1 83498992 162774003 A_14_P139024 A_14_P119649 6851 11252 4402 1 83964675 162743793 A_14_P139024 A_14_P119649 6857 11290 4434 1 83737764 161009917 A_14_P139024 A_14_P119649 3.35E-05 0.088371089 -0.244154974 No_CNA Segment_12 1 A_16_P15320118 A_16_P35335034 11084 11085 11084 11085 2 1 162783776 162820219 A_16_P15320118 A_16_P35335034 11253 11254 2 1 162753566 162790009 A_16_P15320118 A_16_P35335034 11291 11292 2 1 161020691 161056133 A_16_P15320118 A_16_P35335034 -0.002471737 -2.554194153 -4.498948811 Loss Segment_13 1 A_16_P15320226 A_14_P107029 11086 14180 11086 14180 3095 1 162824797 204112403 A_16_P15320226 A_14_P107029 11255 14349 3095 1 162794587 204081531 A_16_P15320226 A_14_P107029 11293 14387 3095 1 161061712 202347654 A_16_P15320226 A_14_P107029 7.16E-05 0.1285091 -0.17952877 No_CNA Segment_14_MDM4 1 A_16_P15417644 A_16_P00237753 14181 14248 14181 14248 68 1 204127801 204855723 A_16_P15417644 A_16_P00237753 14350 14417 68 1 204096929 204824851 A_16_P15417644 A_16_P00237753 14388 14455 68 1 202364053 203090974 A_16_P15417644 A_16_P00237753 0.002186418 2.359280067 3.412235177 Gain Segment_15 1 A_16_P00237767 A_14_P123812 14249 17098 14249 17098 2850 1 204866288 242241356 A_16_P00237767 A_14_P123812 14418 17283 2866 1 204835416 242404658 A_16_P00237767 A_14_P123812 14456 17322 2867 1 203102540 240470781 A_16_P00237767 A_14_P123812 0.000298088 0.367448043 0.205186782 No_CNA Segment_16 1 A_16_P35530505 A_16_P15510015 17099 17104 17099 17104 6 1 242257357 242323723 A_16_P35530505 A_16_P15510015 17284 17289 6 1 242420659 242487025 A_16_P35530505 A_16_P15510015 17323 17328 6 1 240487783 240553148 A_16_P35530505 A_16_P15510015 -0.001683259 -1.722498417 -3.159835651 Loss Segment_17_AKT3 1 A_16_P15510091 A_16_P00297387 17105 17725 17105 17725 621 1 242349104 248930448 A_16_P15510091 A_16_P00297387 17290 17910 621 1 242512406 249224647 A_16_P15510091 A_16_P00297387 17329 17949 621 1 240579530 247190770 A_16_P15510091 A_16_P00297387 0.000985304 1.092332047 1.372322391 Gain Segment_18 2 A_16_P00297410 A_16_P00424511 17726 24363 Null Null 6638 2 29840 91840414 A_16_P00297410 A_16_P00424511 17911 24548 6638 2 29840 92028440 A_16_P00297410 A_16_P00424511 17950 24592 6643 2 20341 91391667 A_16_P00297410 A_16_P00424511 -9.67E-05 -0.048939167 -0.582845465 No_CNA Segment_19 2 A_16_P00424515 A_16_P00424600 24364 24372 Null Null 9 2 91883715 94853174 A_16_P00424515 A_16_P00424600 24549 24557 9 2 92071741 95518919 A_16_P00424515 A_16_P00424600 24593 24601 9 2 91435969 94882146 A_16_P00424515 A_16_P00424600 -0.000970556 -0.970731282 -2.643445283 Loss Segment_20 2 A_16_P00424605 A_16_P00446680 24373 25707 Null Null 1335 2 94862197 113410858 A_16_P00424605 A_16_P00446680 24558 25895 1338 2 95527942 114168435 A_16_P00424605 A_16_P00446680 24602 25938 1337 2 94892170 113884405 A_16_P00424605 A_16_P00446680 0.000227564 0.29305898 0.181666735 No_CNA Segment_21 2 A_14_P136177 A_16_P35817479 25708 25710 Null Null 3 2 113436458 113558894 A_14_P136177 A_16_P35817479 25896 25898 3 2 114194035 114316471 A_14_P136177 A_16_P35817479 25939 25941 3 2 113911006 114032441 A_14_P136177 A_16_P35817479 -0.001282468 -1.299740092 -3.378920758 Loss Segment_22 2 A_16_P00446711 A_16_P03808451 25711 35271 Null Null 9561 2 113671760 241898714 A_16_P00446711 A_16_P03808451 25899 35461 9563 2 114429337 242840865 A_16_P00446711 A_16_P03808451 25942 35507 9566 2 114146308 242489038 A_16_P00446711 A_16_P03808451 0.000309073 0.379035317 0.373860638 No_CNA Segment_23 2 A_16_P03808460 A_14_P134900 35272 35293 Null Null 22 2 241900961 242006389 A_16_P03808460 A_14_P134900 35462 35483 22 2 242843112 242948540 A_16_P03808460 A_14_P134900 35508 35529 22 2 242492286 242596713 A_16_P03808460 A_14_P134900 0.001522848 1.659339307 3.235887906 Gain Segment_24 2 A_16_P16101712 A_16_P00632349 35294 35305 Null Null 12 2 242010895 242126745 A_16_P16101712 A_16_P00632349 35484 35495 12 2 242953046 243068896 A_16_P16101712 A_16_P00632349 35530 35541 12 2 242602220 242717069 A_16_P16101712 A_16_P00632349 0.000743591 0.837369545 1.398433763 Gain Segment_25 3 A_16_P00632359 A_16_P00905833 35306 50347 Null Null 15042 3 21891 198168857 A_16_P00632359 A_16_P00905833 35496 50542 15047 3 63565 197895728 A_16_P00632359 A_16_P00905833 35542 50585 15044 3 39066 199379625 A_16_P00632359 A_16_P00905833 0.000131104 0.191312119 0 No_CNA Segment_26 4 A_16_P16563921 A_16_P16563921 50348 50348 Null Null 1 4 51018 52073 A_16_P16563921 A_16_P16563921 50543 50543 1 4 50912 57331 A_16_P16563921 A_16_P16563927 50586 50587 2 4 41413 57331 A_16_P16563921 A_16_P16563927 -0.000251062 -0.211801032 -1.2735005 Loss Segment_27 4 A_14_P111185 A_16_P16678655 50349 53618 Null Null 3270 4 72054 49081773 A_14_P111185 A_16_P16678655 50544 53813 3270 4 71946 49083790 A_14_P111185 A_16_P16678655 50588 53859 3272 4 62447 48778047 A_14_P111185 A_16_P16678655 0.000532781 0.615005711 0.314912049 No_CNA Segment_28 4 A_16_P36730685 A_16_P16701674 53619 54264 Null Null 646 4 49213020 61865518 A_16_P36730685 A_16_P16701674 53814 54459 646 4 49215037 62731236 A_16_P36730685 A_16_P16701674 53860 54505 646 4 48910295 62413331 A_16_P36730685 A_16_P16701674 -0.000769979 -0.759160947 -2.325056216 Loss Segment_29 4 A_16_P36754067 A_14_P129014 54265 57395 Null Null 3131 4 61872234 102887074 A_16_P36754067 A_16_P01041090 54460 57591 3132 4 62737952 103807318 A_16_P36754067 A_14_P129014 54506 57636 3131 4 62421048 104027166 A_16_P36754067 A_16_P01041090 0.000217259 0.282189615 -0.324474684 No_CNA Segment_30 4 A_16_P16795417 A_16_P36849975 57396 57397 Null Null 2 4 102906160 102932068 A_16_P16795417 A_16_P36849975 57592 57593 2 4 103827317 103853225 A_16_P16795417 A_16_P36849975 57637 57638 2 4 104047267 104072174 A_16_P16795417 A_16_P36849975 -0.001281036 -1.298228923 -3.360681949 Loss Segment_31 4 A_14_P109440 A_16_P37058728 57398 63011 Null Null 5614 4 102945692 190016232 A_14_P109440 A_16_P37058753 57594 63212 5619 4 103866849 190904410 A_14_P109440 A_16_P37058728 57639 63255 5617 4 104086799 191173881 A_14_P109440 A_16_P37058753 0.000508791 0.589699992 0.266296188 No_CNA Segment_32 5 A_16_P01162814 A_16_P17420075 63012 75605 Null Null 12594 5 37193 181270305 A_16_P01162814 A_16_P17420075 63213 75809 12597 5 37191 180697306 A_16_P01162814 A_16_P17420075 63256 75852 12597 5 90692 180629412 A_16_P01162814 A_16_P17420075 0.000324155 0.394944645 0 No_CNA Segment_33 6 A_16_P17420794 A_16_P17566386 75606 80696 Null Null 5091 6 152133 62639495 A_16_P01406705 A_16_P17566386 75810 80952 5143 6 213129 63349400 A_16_P17420794 A_16_P17566386 75853 80999 5147 6 97634 63406859 A_16_P01406705 A_16_P17566386 -0.000461693 -0.433977097 0.956736114 No_CNA Segment_34 6 A_16_P17566505 A_16_P01642182 80697 88018 Null Null 7322 6 62698812 170598208 A_16_P17566505 A_16_P01642182 80953 88275 7323 6 63408717 170907296 A_16_P17566505 A_16_P01642182 81000 88321 7322 6 63467177 170748721 A_16_P17566505 A_16_P01642182 -0.001707965 -1.748559299 -0.673686261 No_CNA Segment_35 6 A_16_P17820807 A_16_P17821013 88019 88021 Null Null 3 6 170611441 170716927 A_16_P17820807 A_16_P17821013 88276 88278 3 6 170920529 171026015 A_16_P17820807 A_16_P17821013 88322 88324 3 6 170762955 170867440 A_16_P17820807 A_16_P17821013 -0.000341154 -0.306831279 1.114429855 No_CNA Segment_36 7 A_16_P01642195 A_14_P133371 88022 88075 17726 17779 54 7 44629 1027177 A_16_P01642195 A_14_P133371 88279 88332 54 7 44629 1066813 A_16_P01642195 A_14_P133371 88325 88378 54 7 140213 1032839 A_16_P01642195 A_14_P133371 0.005023753 5.352133418 0.114552638 Gain Segment_37 7 A_16_P01642832 A_16_P37901434 88076 88077 17780 17781 2 7 1030130 1035087 A_16_P01642832 A_16_P37901434 88333 88334 2 7 1069766 1074723 A_16_P01642832 A_16_P37901434 88379 88380 2 7 1036793 1040749 A_16_P01642832 A_16_P37901434 0.001740169 1.888571433 -1.124989217 No_CNA Segment_38 7 A_16_P01642836 A_16_P01697629 88078 91321 17782 21025 3244 7 1041044 39619357 A_16_P01642836 A_16_P01697629 88335 91578 3244 7 1080680 39658956 A_16_P01642836 A_16_P01697629 88381 91624 3244 7 1047707 39624981 A_16_P01642836 A_16_P01697629 0.005147294 5.482445363 0.161188762 Gain Segment_39 7 A_16_P17917217 A_16_P01697799 91322 91333 21026 21037 12 7 39626910 39796943 A_16_P17917217 A_16_P01697799 91579 91590 12 7 39666509 39836542 A_16_P17917217 A_16_P01697799 91625 91636 12 7 39633535 39802567 A_16_P17917217 A_16_P01697799 0.003693307 3.948763286 -0.387686394 Gain Segment_40_GLI3 7 A_14_P136030 A_16_P01714295 91334 92255 21038 21959 922 7 39807284 52080294 A_14_P136030 A_16_P01714295 91591 92515 925 7 39846883 52147990 A_14_P136030 A_16_P01714295 91637 92558 922 7 39813909 52114984 A_14_P136030 A_16_P01714295 0.004914861 5.237272686 0.073446203 Gain Segment_41 7 A_16_P17945900 A_16_P01716685 92256 92331 21960 22035 76 7 52113953 53942921 A_16_P17945900 A_16_P01716685 92516 92591 76 7 52181649 54010614 A_16_P17945900 A_16_P01716685 92559 92634 76 7 52149644 53977608 A_16_P17945900 A_16_P01716685 0.006662724 7.080937515 0.733258191 Gain Segment_42 7 A_16_P17950095 A_16_P17951124 92332 92346 22036 22050 15 7 53992249 54509536 A_16_P17950095 A_16_P17951124 92592 92606 15 7 54059942 54577229 A_16_P17950095 A_16_P17951124 92635 92649 15 7 54027937 54544223 A_16_P17950095 A_16_P17951124 0.012856965 13.6146925 3.071562749 Gain Segment_43 7 A_16_P01717355 A_16_P17951400 92347 92357 22051 22061 11 7 54530569 54639334 A_16_P01717355 A_16_P17951400 92607 92617 11 7 54598262 54707027 A_16_P01717355 A_16_P17951400 92650 92660 11 7 54566257 54674021 A_16_P01717355 A_16_P17951400 0.023287125 24.6165429 7.008912247 Gain Segment_44_EGFR 7 A_16_P17951497 A_16_P01718470 92358 92403 22062 22107 46 7 54669994 55260528 A_16_P17951497 A_16_P01718470 92618 92663 46 7 54737687 55328221 A_16_P17951497 A_16_P01718470 92661 92706 46 7 54705682 55295215 A_16_P17951497 A_16_P01718470 0.041769487 44.11194552 13.98593983 Gain Segment_45 7 A_14_P105107 A_16_P17953499 92404 92420 22108 22124 17 7 55313949 55508516 A_14_P105107 A_16_P17953499 92664 92680 17 7 55381642 55576209 A_14_P105107 A_16_P17953499 92707 92723 17 7 55349637 55543203 A_14_P105107 A_16_P17953499 0.024701292 26.10822173 7.542755253 Gain Segment_46 7 A_14_P129852 A_16_P17953746 92421 92430 22125 22134 10 7 55520542 55607147 A_14_P129852 A_16_P17953746 92681 92690 10 7 55588235 55674840 A_14_P129852 A_16_P17953746 92724 92733 10 7 55556230 55641834 A_14_P129852 A_16_P17953746 0.017856457 18.88821321 4.958853829 Gain Segment_47 7 A_14_P120505 A_16_P01719227 92431 92475 22135 22179 45 7 55645025 56064398 A_14_P120505 A_16_P01719227 92691 92735 45 7 55712718 56132091 A_14_P120505 A_16_P01719227 92734 92778 45 7 55680713 56099085 A_14_P120505 A_16_P01719227 0.010298854 10.91636821 2.105884666 Gain Segment_48 7 A_16_P17954579 A_16_P17955705 92476 92511 22180 22215 36 7 56066455 56611553 A_16_P17954579 A_16_P17955705 92736 92771 36 7 56134148 56679246 A_16_P17954579 A_16_P17955705 92779 92814 36 7 56102143 56646240 A_16_P17954579 A_16_P17955705 0.007271015 7.722570229 0.962886132 Gain Segment_49 7 A_16_P38037734 A_16_P01737446 92512 93840 22216 23544 1329 7 56618847 80626061 A_16_P38037734 A_16_P01737446 92772 94120 1349 7 56686540 80255377 A_16_P38037734 A_16_P01737446 92815 94163 1349 7 56654535 80092813 A_16_P38037734 A_16_P01737446 0.004864711 5.184373493 0.054514604 Gain Segment_50 7 A_16_P01737462 A_16_P01738360 93841 93882 23545 23586 42 7 80632579 81163001 A_16_P01737462 A_16_P01738360 94121 94162 42 7 80261895 80792317 A_16_P01737462 A_16_P01738360 94164 94205 42 7 80100332 80629753 A_16_P01737462 A_16_P01738360 0.003911562 4.178981495 -0.305295749 Gain Segment_51 7 A_16_P01738386 A_16_P18038667 93883 95182 23587 24886 1300 7 81183231 97873987 A_16_P01738386 A_16_P18038667 94163 95462 1300 7 80812547 97503299 A_16_P01738386 A_16_P18038667 94206 95505 1300 7 80650984 97340735 A_16_P01738386 A_16_P18038667 0.004711257 5.022508129 -0.003413879 Gain Segment_52 7 A_16_P01762666 A_16_P01762669 95183 95184 24887 24888 2 7 97887804 97917053 A_16_P01762666 A_16_P01762669 95463 95464 2 7 97517116 97546365 A_16_P01762666 A_16_P01762669 95506 95507 2 7 97355553 97383801 A_16_P01762666 A_16_P01762669 0.000775376 0.870897508 -1.489195034 No_CNA Segment_53_MET 7 A_16_P38123084 A_14_P112581 95185 97692 24889 27396 2508 7 97938463 128458658 A_16_P38123084 A_14_P112581 95465 97972 2508 7 97567775 128098712 A_16_P38123084 A_14_P112581 95508 98015 2508 7 97406212 127885448 A_16_P38123084 A_14_P112581 0.004145302 4.425533444 -0.217059574 Gain Segment_54_METTL2B 7 A_16_P38198206 A_16_P38198339 97693 97698 27397 27402 6 7 128464718 128520904 A_16_P38198206 A_16_P38198339 97973 97978 6 7 128104772 128160958 A_16_P38198206 A_16_P38198339 98016 98021 6 7 127892509 127947694 A_16_P38198206 A_16_P38198339 0.002290787 2.46936987 -0.917132688 Gain Segment_55_SMO/SHH 7 A_14_P126973 A_16_P18186723 97699 100527 27403 30231 2829 7 128546512 159326376 A_14_P126973 A_16_P18186723 97979 100847 2869 7 128186566 159119066 A_14_P126973 A_16_P18186723 98022 100864 2843 7 127974303 158811327 A_14_P126973 A_16_P18186723 0.003592465 3.842394151 -0.42575385 Gain Segment_56 8 A_16_P18186912 A_16_P01857652 100528 101109 Null Null 582 8 123309 7196223 A_16_P18186912 A_16_P01857652 100848 101433 586 8 73309 7053745 A_16_P18186912 A_16_P01857652 100865 101455 591 8 63810 7040655 A_16_P18186912 A_16_P01857652 0.000115522 0.174876154 1.076866741 Gain Segment_57 8 A_16_P01857660 A_16_P01857685 101110 101114 Null Null 5 8 7410796 7895564 A_16_P01857660 A_16_P01857685 101434 101438 5 8 7268318 7753086 A_16_P01857660 A_16_P01857685 101456 101460 5 8 7256229 7789996 A_16_P01857660 A_16_P01857685 -0.001273385 -1.290158736 -1.759716526 Loss Segment_58 8 A_16_P01857697 A_16_P18292805 101115 103845 Null Null 2731 8 8236706 46628478 A_16_P01857697 A_16_P18292805 101439 104170 2732 8 8094228 47540100 A_16_P01857697 A_16_P18292805 101461 104193 2733 8 8132139 47658765 A_16_P01857697 A_16_P18292805 5.09E-05 0.10670595 0.944876396 No_CNA Segment_59 8 A_16_P01907173 A_16_P01907194 103846 103848 Null Null 3 8 46661889 46709783 A_16_P01907173 A_16_P01907194 104171 104173 3 8 47573511 47621405 A_16_P01907173 A_16_P01907194 104194 104196 3 8 47693177 47740070 A_16_P01907173 A_16_P01907194 0.00274986 2.953604798 6.45700835 Gain Segment_60 8 A_16_P38384874 A_16_P38621406 103849 110864 Null Null 7016 8 46731316 145069212 A_16_P38384874 A_16_P38621406 104174 111197 7024 8 47642938 146294598 A_16_P38384874 A_16_P38621406 104197 111212 7016 8 47762604 146264902 A_16_P38384874 A_16_P38621406 -0.000636938 -0.618827865 -0.459893615 No_CNA Segment_61 9 A_16_P02044629 A_16_P18572673 110865 112266 30232 31633 1402 9 162630 19604120 A_16_P02044629 A_16_P18572673 111198 112599 1402 9 162630 19604118 A_16_P02044629 A_16_P18572673 111213 112614 1402 9 153131 19593618 A_16_P02044629 A_16_P18572673 -0.003205068 -3.327720021 -1.498138364 Loss Segment_62_CDKN2A/B 9 A_14_P116599 A_16_P18587402 112267 112293 31634 31660 27 9 19725700 25980092 A_14_P116599 A_16_P18587402 112600 112626 27 9 19725698 25980090 A_14_P116599 A_16_P18587402 112615 112641 27 9 19716199 25969590 A_14_P116599 A_16_P18587402 -0.006051251 -6.329905882 -4.193347475 Loss Segment_63 9 A_16_P02082042 A_16_P38701836 112294 112563 31661 31930 270 9 26132752 33237572 A_16_P02082042 A_16_P38701836 112627 112896 270 9 26132750 33237570 A_16_P02082042 A_16_P38701836 112642 112911 270 9 26123251 33227070 A_16_P02082042 A_16_P38701836 -0.003397524 -3.530724376 -1.680385304 Loss Segment_64 9 A_14_P139968 A_16_P02099132 112564 113103 31931 32470 540 9 33247913 41446745 A_14_P139968 A_16_P02099295 112897 113440 544 9 33247911 45529768 A_14_P139968 A_16_P02099295 112912 113466 555 9 33238412 45419264 A_14_P139968 A_16_P02099295 -0.002209578 -2.277665273 -0.555452849 Loss Segment_65_NOTCH1 9 A_14_P201625 A_16_P02196397 113104 118814 32471 38181 5711 9 41658301 138179945 A_16_P38726904 A_16_P02196397 113441 119165 5725 9 46127570 141074397 A_16_P38726904 A_16_P02196397 113467 119187 5721 9 46018067 140193718 A_16_P38726904 A_16_P02196397 -0.001073759 -1.079590771 0.52011724 No_CNA Segment_66 10 A_16_P02196410 A_14_P101190 118815 120399 38182 39766 1585 10 79103 21557727 A_16_P02196410 A_14_P101190 119166 120750 1585 10 125043 21846656 A_16_P02196410 A_14_P101190 119188 120773 1586 10 115544 21886162 A_16_P02196410 A_14_P101190 -0.007251337 -7.595769619 -0.397032064 Loss Segment_67 10 A_16_P38966956 A_16_P02229194 120400 120402 39767 39769 3 10 21566251 21592150 A_16_P38966956 A_16_P02229194 120751 120753 3 10 21855180 21881079 A_16_P38966956 A_16_P02229194 120774 120776 3 10 21895687 21920585 A_16_P38966956 A_16_P02229194 -0.00397988 -4.145000535 3.227868173 Loss Segment_68 10 A_16_P18860678 A_16_P18873818 120403 120816 39770 40183 414 10 21599376 27227947 A_16_P18860678 A_16_P18873818 120754 121167 414 10 21888305 27516876 A_16_P18860678 A_16_P18873818 120777 121190 414 10 21928812 27556382 A_16_P18860678 A_16_P18873818 -0.00744481 -7.799847434 -0.611407962 Loss Segment_69 10 A_14_P126059 A_16_P18873883 120817 120819 40184 40186 3 10 27231235 27248822 A_14_P126059 A_16_P18873883 121168 121170 3 10 27520164 27537751 A_14_P126059 A_16_P18873883 121191 121193 3 10 27560671 27577257 A_14_P126059 A_16_P18873883 -0.004609731 -4.809374108 2.529969281 Loss Segment_70 10 A_16_P02236999 A_16_P18899538 120820 121527 40187 40894 708 10 27252989 38257500 A_16_P02236999 A_16_P18899538 121171 121878 708 10 27541918 38546428 A_16_P02236999 A_16_P18899538 121194 121901 708 10 27582425 38585934 A_16_P02236999 A_16_P18899538 -0.007147417 -7.486153314 -0.28188435 Loss Segment_71 10 A_16_P02251651 A_16_P02251775 121528 121538 40895 40905 11 10 38267000 42335864 A_16_P02251651 A_16_P02251775 121879 121889 11 10 38555928 42831312 A_16_P02251651 A_16_P02251775 121902 121912 11 10 38596435 42150818 A_16_P02251651 A_16_P02251775 -0.002486654 -2.569928774 4.882420494 Loss Segment_72 10 A_16_P18900939 A_14_P139625 121539 122900 40906 42267 1362 10 42368671 68603716 A_16_P18900939 A_14_P139625 121890 123456 1567 10 42864119 70363473 A_16_P18900939 A_14_P139625 121913 123492 1580 10 42184626 70032979 A_16_P18900939 A_14_P139625 -0.007027412 -7.359570636 -0.148914114 Loss Segment_73 10 A_16_P18964807 A_16_P02285500 122901 122903 42268 42270 3 10 68611514 68630455 A_16_P18964807 A_16_P02285500 123457 123459 3 10 70371271 70390212 A_16_P18964807 A_16_P02285500 123493 123495 3 10 70041778 70059718 A_16_P18964807 A_16_P02285500 -0.003133521 -3.252251412 4.165666798 Loss Segment_74 10 A_16_P02285509 A_14_P127947 122904 123114 42271 42481 211 10 68635700 70887737 A_16_P02285509 A_14_P127947 123460 123670 211 10 70395457 72647494 A_16_P02285509 A_14_P127947 123496 123706 211 10 70065964 72317000 A_16_P02285509 A_14_P127947 -0.006869393 -7.192891302 0.026176117 Loss Segment_75 10 A_16_P18970194 A_16_P02288636 123115 123116 42482 42483 2 10 70893976 70899469 A_16_P18970194 A_16_P02288636 123671 123672 2 10 72653733 72659226 A_16_P18970194 A_16_P02288636 123707 123708 2 10 72324240 72328732 A_16_P18970194 A_16_P02288636 -0.003914636 -4.076180535 3.300160937 Loss Segment_76 10 A_16_P02288646 A_16_P18976601 123117 123364 42484 42731 248 10 70906325 73622468 A_16_P02288646 A_16_P18976601 123673 123920 248 10 72666082 75382226 A_16_P02288646 A_16_P18976601 123709 123956 248 10 72336589 75051732 A_16_P02288646 A_16_P18976601 -0.006925501 -7.252074389 -0.03599344 Loss Segment_77 10 A_14_P200271 A_16_P18976681 123365 123366 42732 42733 2 10 73639115 73652296 A_14_P200271 A_16_P18976681 123921 123922 2 10 75398873 75412054 A_14_P200271 A_16_P18976681 123957 123958 2 10 75069380 75081560 A_14_P200271 A_16_P18976681 -0.004221055 -4.399394803 2.960636776 Loss Segment_78 10 A_16_P02292432 A_16_P39103739 123367 123860 42734 43227 494 10 73656537 80202922 A_16_P02292432 A_16_P39103739 123923 124416 494 10 75416295 81962678 A_16_P02292432 A_16_P39103739 123959 124452 494 10 75086802 81952158 A_16_P02292432 A_16_P39103739 -0.006805368 -7.125356768 0.097118548 Loss Segment_79 10 A_16_P02301722 A_16_P02301726 123861 123862 43228 43229 2 10 80211632 80247109 A_16_P02301722 A_16_P02301726 124417 124418 2 10 81971388 82006865 A_16_P02301722 A_16_P02301726 124453 124454 2 10 81961869 81996345 A_16_P02301722 A_16_P02301726 -0.001860091 -1.909023123 5.576676468 No_CNA Segment_80_PTEN/SUFU 10 A_16_P18994116 A_16_P02353683 123863 126565 43230 45932 2703 10 80256265 117536557 A_16_P18994116 A_16_P02353683 124419 127121 2703 10 82016021 119296068 A_16_P18994116 A_16_P02353683 124455 127157 2703 10 82006502 119285558 A_16_P18994116 A_16_P02353683 -0.006692243 -7.006030927 0.222465757 Loss Segment_81 10 A_14_P202165 A_14_P201028 126566 126570 45933 45937 5 10 117545567 117568159 A_14_P202165 A_14_P201028 127122 127126 5 10 119305078 119327670 A_14_P202165 A_14_P201028 127158 127162 5 10 119295569 119317160 A_14_P202165 A_14_P201028 -0.004244932 -4.42458015 2.934180537 Loss Segment_82 10 A_16_P02353761 A_16_P02363777 126571 127078 45938 46445 508 10 117578933 124102121 A_16_P02353761 A_16_P02363777 127127 127634 508 10 119338444 125861637 A_16_P02353761 A_16_P02363777 127163 127670 508 10 119328935 125851127 A_16_P02353761 A_16_P02363777 -0.006665068 -6.977366675 0.252576451 Loss Segment_83 10 A_16_P19099424 A_14_P134214 127079 127081 46446 46448 3 10 124108740 124264780 A_16_P19099424 A_14_P134214 127635 127637 3 10 125868256 125953349 A_16_P19099424 A_14_P134214 127671 127673 3 10 125858747 125942839 A_16_P19099424 A_14_P134214 -0.004575296 -4.773051232 2.568125065 Loss Segment_84 10 A_16_P19099607 A_14_P139319 127082 127203 46449 46570 122 10 124297930 125885278 A_16_P19099607 A_14_P139319 127638 127759 122 10 125986499 127573847 A_16_P19099607 A_14_P139319 127674 127795 122 10 125976990 127563337 A_16_P19099607 A_14_P139319 -0.006411449 -6.709846897 0.533595691 Loss Segment_85 10 A_16_P19103797 A_16_P02366383 127204 127207 46571 46574 4 10 125899179 125925523 A_16_P19103797 A_16_P02366383 127760 127763 4 10 127587748 127614092 A_16_P19103797 A_16_P02366383 127796 127799 4 10 127578239 127603582 A_16_P19103797 A_16_P02366383 -0.001362387 -1.384039434 6.128151646 No_CNA Segment_86 10 A_14_P116116 A_16_P39238332 127208 127767 46575 47134 560 10 125933743 133661783 A_14_P116116 A_16_P39238332 127764 128323 560 10 127622312 135475287 A_14_P116116 A_16_P39238332 127800 128359 560 10 127612803 135356671 A_14_P116116 A_16_P02378431 -0.006371261 -6.667456204 0.578125484 Loss Segment_87_HRAS 11 A_16_P02378433 A_14_P132919 127768 130786 47135 50153 3019 11 191871 37704829 A_16_P02378433 A_14_P132919 128324 131342 3019 11 191871 37726379 A_16_P02378433 A_14_P132919 128360 131387 3028 11 182372 37682455 A_16_P02378433 A_14_P132919 0.001385703 1.514676964 1.333005848 Gain Segment_88 11 A_16_P39331364 A_16_P02446409 130787 131581 50154 50948 795 11 37730596 55290248 A_16_P39331364 A_16_P02446409 131343 132143 801 11 37752146 55057724 A_16_P39331364 A_16_P02446409 131388 132188 801 11 37709223 54813800 A_16_P39331364 A_16_P02446409 0.000589022 0.674328522 0.411616592 No_CNA Segment_89 11 A_16_P19243221 A_16_P19430727 131582 138301 50949 57668 6720 11 55311876 135057720 A_16_P19243221 A_16_P19430727 132144 138863 6720 11 55079352 134927614 A_16_P19243221 A_16_P19430727 132189 138908 6720 11 54836429 134432324 A_16_P19243221 A_16_P19430727 -0.000328656 -0.293648441 -0.649709315 No_CNA Segment_90_KDM5A 12 A_16_P02555240 A_16_P19431423 138302 138324 57669 57691 23 12 53926 285442 A_16_P02555240 A_16_P19431423 138864 138886 23 12 163092 394608 A_16_P02555240 A_16_P19431423 138909 138931 23 12 33854 264369 A_16_P02555240 A_16_P19431423 0.001271943 1.394681992 1.310903189 Gain Segment_91 12 A_16_P39556816 A_16_P19483702 138325 140337 57692 59704 2013 12 295017 22747826 A_16_P39556816 A_16_P19483702 138887 140900 2014 12 404183 22900760 A_16_P39556816 A_16_P19483702 138932 140944 2013 12 274945 22791527 A_16_P39556816 A_16_P19483702 0.000306537 0.376360628 -0.1223696 No_CNA Segment_92 12 A_16_P02585740 A_16_P19484198 140338 140346 59705 59713 9 12 22765234 22971393 A_16_P02585740 A_16_P19484198 140901 140909 9 12 22918168 23124327 A_16_P02585740 A_16_P19484198 140945 140953 9 12 22809936 23015094 A_16_P02585740 A_16_P19484198 0.00145001 1.582508298 1.575266035 Gain Segment_93 12 A_16_P39611980 A_16_P02627888 140347 143041 59714 62408 2695 12 22984226 57430648 A_16_P39611980 A_16_P02627888 140910 143604 2695 12 23137160 57824431 A_16_P39611980 A_16_P02627888 140954 143648 2695 12 23028928 56110198 A_16_P39611980 A_16_P02627888 0.000165465 0.2275565 -0.331809285 No_CNA Segment_94_GLI1/CDK4 12 A_16_P02627893 A_16_P19557634 143042 143132 62409 62499 91 12 57433235 58172216 A_16_P02627893 A_16_P19557634 143605 143695 91 12 57827018 58565999 A_16_P02627893 A_16_P19557634 143649 143739 91 12 56113786 56851766 A_16_P02627893 A_16_P19557634 0.003219939 3.449449497 4.20295913 Gain Segment_95 12 A_14_P118824 A_16_P19558402 143133 143143 62500 62510 11 12 58197676 58492255 A_14_P118824 A_16_P19558402 143696 143706 11 12 58591459 58886038 A_14_P118824 A_16_P19558402 143740 143750 11 12 56878227 57171805 A_14_P118824 A_16_P19558402 0.000466371 0.544955472 0.114925237 No_CNA Segment_96 12 A_16_P19558518 A_16_P19561043 143144 143195 62511 62562 52 12 58531813 59628227 A_16_P19558518 A_16_P19561043 143707 143758 52 12 58925596 60022008 A_16_P19558518 A_16_P19561043 143751 143802 52 12 57212364 58307775 A_16_P19558518 A_16_P19561043 -0.000672787 -0.656641184 -1.576304907 Loss Segment_97 12 A_16_P19561069 A_16_P19565997 143196 143306 62563 62673 111 12 59635289 62006914 A_16_P19561069 A_16_P19565997 143759 143869 111 12 60029070 62400695 A_16_P19561069 A_16_P19565997 143803 143913 111 12 58315838 60686462 A_16_P19561069 A_16_P19565997 0.000236715 0.302711641 -0.226029497 No_CNA Segment_98 12 A_16_P39697708 A_16_P19566302 143307 143317 62674 62684 11 12 62013373 62119847 A_16_P39697708 A_16_P19566302 143870 143880 11 12 62407154 62513628 A_16_P39697708 A_16_P19566302 143914 143924 11 12 60693922 60799395 A_16_P39697708 A_16_P19566302 0.002089983 2.257559789 2.525391375 Gain Segment_99 12 A_16_P39698035 A_16_P02641086 143318 143713 62685 63080 396 12 62130191 67126171 A_16_P39698035 A_16_P02641086 143881 144276 396 12 62523972 67519951 A_16_P39698035 A_16_P02641086 143925 144320 396 12 60810740 65805718 A_16_P39698035 A_16_P02641086 0.000500314 0.580758928 0.165318091 No_CNA Segment_100 12 A_16_P19578665 A_16_P39710992 143714 143722 63081 63089 9 12 67160890 67288097 A_16_P19578665 A_16_P39710992 144277 144285 9 12 67554670 67681877 A_16_P19578665 A_16_P39710992 144321 144329 9 12 65841438 65967644 A_16_P19578665 A_16_P39710992 0.00278884 2.994721251 3.562935612 Gain Segment_101 12 A_14_P109487 A_14_P132316 143723 143822 63090 63189 100 12 67295391 68710564 A_14_P109487 A_14_P132316 144286 144385 100 12 67689171 69104344 A_14_P109487 A_14_P132316 144330 144429 100 12 65975939 67390111 A_14_P109487 A_14_P132316 0.000352976 0.425344987 -0.053424812 No_CNA Segment_102_MDM2 12 A_16_P02643343 A_16_P19583690 143823 143873 63190 63240 51 12 68715154 69301639 A_16_P02643343 A_16_P19583690 144386 144436 51 12 69108934 69695419 A_16_P02643343 A_16_P19583690 144430 144480 51 12 67395702 67981186 A_16_P02643343 A_16_P19583690 0.004502019 4.801802507 6.106376692 Gain Segment_103_FRS2 12 A_16_P39715918 A_16_P39718619 143874 143980 63241 63347 107 12 69328147 70509493 A_16_P39715918 A_16_P39718619 144437 144543 107 12 69721927 70903273 A_16_P39715918 A_16_P39718619 144481 144587 107 12 68008695 69189040 A_16_P39715918 A_16_P39718619 0.002476523 2.665285611 3.09925965 Gain Segment_104 12 A_14_P110650 A_16_P19589113 143981 144076 63348 63443 96 12 70516899 71610397 A_14_P110650 A_16_P19589113 144544 144639 96 12 70910679 72004177 A_14_P110650 A_16_P19589113 144588 144683 96 12 69197447 70289944 A_14_P110650 A_16_P19589113 0.000792583 0.889047172 0.599229395 No_CNA Segment_105 12 A_16_P19589146 A_14_P132020 144077 144111 63444 63478 35 12 71618793 71962337 A_16_P19589146 A_14_P132020 144640 144674 35 12 72012573 72356117 A_16_P19589146 A_14_P132020 144684 144718 35 12 70299341 70641884 A_16_P19589146 A_14_P132020 -0.000432107 -0.402769139 -1.218983628 Loss Segment_106 12 A_16_P19590013 A_16_P19734064 144112 148713 63479 68080 4602 12 71978399 133202990 A_16_P19590013 A_16_P19734064 144675 149297 4623 12 72372179 133779576 A_16_P19590013 A_16_P19734064 144719 149320 4602 12 70658947 132289149 A_16_P19590013 A_16_P19734064 0.000395051 0.469726207 0.009041121 No_CNA Segment_107 13 A_16_P02731708 A_16_P19968418 148714 155750 Null Null 7037 13 18721886 114340831 A_16_P02731708 A_16_P19968418 149298 156334 7037 13 19296026 115106306 A_16_P02731708 A_16_P19968418 149321 156360 7040 13 18194527 114123908 A_16_P02731708 A_16_P19968418 -0.000557616 -0.535157508 0 No_CNA Segment_108 14 A_16_P02870197 A_16_P20177246 155751 163278 Null Null 7528 14 18302495 106871058 A_16_P02870197 A_16_P20177246 156335 163865 7531 14 19078972 107279270 A_16_P02870197 A_16_P20177246 156361 163898 7538 14 18149473 106349815 A_16_P02870197 A_16_P20177246 -0.000644158 -0.626442931 0 No_CNA Segment_109 15 A_16_P02992133 A_16_P20373036 163279 170617 Null Null 7339 15 19896787 101843770 A_16_P02992133 A_16_P20373036 163866 171248 7383 15 20102040 102383973 A_16_P02992133 A_16_P20373036 163899 171296 7398 15 18362555 100200996 A_16_P02992133 A_16_P20373036 -0.000580343 -0.559130159 0 No_CNA Segment_110 16 A_16_P20373389 A_16_P03199733 170618 176745 Null Null 6128 16 37586 90097206 A_16_P20373389 A_16_P03199733 171249 177377 6129 16 87586 90163614 A_16_P20373389 A_16_P03199733 171297 177457 6161 16 28087 88690615 A_16_P20373389 A_16_P03199733 -0.000440235 -0.411342975 0 No_CNA Segment_111 17 A_16_P40725304 A_14_P123612 176746 181881 68081 73216 5136 17 209447 62407572 A_16_P40725304 A_14_P123612 177378 182516 5139 17 59238 60484933 A_16_P40725304 A_14_P123612 177458 182594 5137 17 59739 57838165 A_16_P40725304 A_14_P123612 -0.000276631 -0.238771109 0.131068031 No_CNA Segment_112_METTL2A/TLK2 17 A_16_P20697387 A_16_P20697624 181882 181891 73217 73226 10 17 62420218 62543223 A_16_P20697387 A_16_P20697624 182517 182526 10 17 60497579 60620584 A_16_P20697387 A_16_P20697624 182595 182604 10 17 57851812 57973816 A_16_P20697387 A_16_P20697624 0.000599834 0.685733135 2.181720497 Gain Segment_113 17 A_14_P115899 A_16_P03301978 181892 183591 73227 74926 1700 17 62561399 83087846 A_14_P115899 A_16_P03301978 182527 184239 1713 17 60638760 81045722 A_14_P115899 A_16_P03301978 182605 184305 1701 17 57992993 78638511 A_14_P115899 A_16_P03301978 -0.000506116 -0.480835022 -0.405856449 No_CNA Segment_114 18 A_16_P03301988 A_16_P03301988 183592 183592 Null Null 1 18 84931 85976 A_16_P03301988 A_16_P03301988 184240 184240 1 18 13815 85976 A_16_P40925767 A_16_P03301988 184306 184307 2 18 4316 75476 A_16_P40925767 A_16_P03301988 -0.001868316 -1.917698697 -5.180358672 Loss Segment_115 18 A_16_P20749897 A_16_P20934575 183593 189008 Null Null 5416 18 131199 80150816 A_16_P20749897 A_16_P20934575 184241 189656 5416 18 131199 77908699 A_16_P20749897 A_16_P20934575 184308 189723 5416 18 121700 76009190 A_16_P20749897 A_16_P20934575 -0.000161029 -0.116832904 -0.003488143 No_CNA Segment_116 18 A_16_P20934629 A_16_P20934837 189009 189018 Null Null 10 18 80167761 80252649 A_16_P20934629 A_16_P20934837 189657 189666 10 18 77925644 78010532 A_16_P20934629 A_16_P20934837 189724 189733 10 18 76027136 76111023 A_16_P20934629 A_16_P20934837 0.000804844 0.901980381 2.925250073 Gain Segment_117 19 A_16_P41114900 A_14_P136136 189019 191334 74927 77242 2316 19 265616 28095727 A_16_P41114900 A_14_P136136 189667 191982 2316 19 265616 28586634 A_16_P41114900 A_14_P136136 189734 192049 2316 19 217117 33277974 A_16_P41114900 A_14_P136136 0.001715033 1.862057911 -0.20203326 No_CNA Segment_118_CCNE1 19 A_16_P03435963 A_16_P20987346 191335 191442 77243 77350 108 19 28146145 30139867 A_16_P03435963 A_16_P20987346 191983 192090 108 19 28637052 30630774 A_16_P03435963 A_16_P20987346 192050 192157 108 19 33329393 35322114 A_16_P03435963 A_16_P20987346 0.002727781 2.930316161 1.608312 Gain Segment_119_PSENEN/DLL3 19 A_14_P139825 A_14_P107974 191443 194253 77351 80161 2811 19 30205391 58581703 A_14_P139825 A_14_P107974 192091 194902 2812 19 30696298 59093070 A_14_P139825 A_14_P107974 192158 194970 2813 19 35388639 63784382 A_14_P139825 A_14_P107974 0.001886544 2.042969808 0.104552713 Gain Segment_120_JAG1 20 A_16_P03469195 A_16_P21109422 194254 196381 80162 82289 2128 20 79605 26201089 A_16_P03469195 A_16_P21109422 194903 197030 2128 20 60246 26181725 A_16_P03469195 A_16_P21109422 194971 197098 2128 20 8747 26129225 A_16_P03469195 A_16_P21109422 0.002488298 2.677706692 0.090991909 Gain Segment_121 20 A_16_P03505118 A_16_P21110129 196382 196390 82290 82298 9 20 26226889 30418335 A_16_P03505118 A_16_P21110129 197031 197039 9 20 26207525 29653011 A_16_P03505118 A_16_P21110129 197099 197107 9 20 26156026 28266172 A_16_P03505118 A_16_P21110129 0.000245072 0.311526224 -5.062770035 No_CNA Segment_122 20 A_16_P21110131 A_16_P21189280 196391 199250 82299 85158 2860 20 31245305 64277821 A_16_P21110131 A_16_P21189280 197040 199899 2860 20 29833108 62909174 A_16_P21110131 A_16_P21189280 197108 199967 2860 20 29297270 62379118 A_16_P21110131 A_16_P21189280 0.002426159 2.612161666 -0.051771277 Gain Segment_123 21 A_16_P21189801 A_16_P21272832 199251 202288 Null Null 3038 21 10637145 46670905 A_16_P03550547 A_16_P21272832 199918 202956 3039 21 10874258 48090817 A_16_P03550547 A_16_P21272832 199968 203109 3142 21 9896630 46914745 A_16_P03550547 A_16_P21272832 -0.000418667 -0.388592983 0 No_CNA Segment_124 22 A_16_P03598346 A_16_P41490179 202289 202899 85159 85769 611 22 15853186 23422218 A_16_P03598324 A_16_P41490179 202960 203574 615 22 16123717 23764405 A_16_P03598324 A_16_P41490179 203110 203730 621 22 14504218 22093905 A_16_P03598324 A_16_P41490179 -0.001565792 -1.598593062 1.115242086 No_CNA Segment_125 22 A_16_P03605435 A_16_P41490236 202900 202901 85770 85771 2 22 23431384 23452850 A_16_P03605435 A_16_P41490236 203575 203576 2 22 23773571 23795037 A_16_P03605435 A_16_P41490236 203731 203732 2 22 22104072 22124537 A_16_P03605435 A_16_P41490236 0.001310684 1.435545544 4.775693021 Gain Segment_126 22 A_16_P03605441 A_16_P21292557 202902 203015 85772 85885 114 22 23459248 24308188 A_16_P03605441 A_16_P21292557 203577 203690 114 22 23801435 24704156 A_16_P03605441 A_16_P21292557 203733 203847 115 22 22131936 23033656 A_16_P03605441 A_16_P21292557 -0.001313452 -1.33242153 1.436357223 No_CNA Segment_127_CSNK1E 22 A_16_P21292572 A_16_P03635214 203016 205351 85886 88221 2336 22 24315637 46091854 A_16_P21292572 A_16_P03635214 203691 206037 2347 22 24711605 46487734 A_16_P21292572 A_16_P03635214 203848 206183 2336 22 23042106 44865898 A_16_P21292572 A_16_P03635214 -0.002674323 -2.767884421 -0.295416491 Loss Segment_128 22 A_16_P03635237 A_14_P109098 205352 205359 88222 88229 8 22 46102639 46152075 A_16_P03635237 A_14_P109098 206038 206045 8 22 46498519 46547978 A_16_P03635237 A_14_P109098 206184 206191 8 22 44877684 44926142 A_16_P03635237 A_14_P109098 -0.001830372 -1.877675498 0.778550954 No_CNA Segment_129 22 A_16_P41546978 A_16_P03641955 205360 205789 88230 88659 430 22 46157125 50781081 A_16_P41546978 A_16_P03641955 206046 206475 430 22 46553020 51219509 A_16_P41546978 A_16_P03641955 206192 206621 430 22 44932185 49565875 A_16_P41546978 A_16_P03641955 -0.002777578 -2.876798352 -0.426812631 Loss Segment_130=X_Chromosome 23 A_16_P21360229 A_16_P21640239 205790 211653 Null Null 5864 23 2790485 155687881 A_16_P21360229 A_16_P21640239 206476 212348 5873 23 2708526 154917542 A_16_P21360229 A_16_P21640239 206622 212494 5873 23 2719027 154570236 A_16_P21360229 A_16_P21640239 -0.000264626 -0.226109007 0 No_CNA